BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023F03LP1|AL428082
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 1513 0.0
>3x_Contig1807
Length = 66587
Score = 1513 bits (759), Expect = 0.0
Identities = 800/816 (98%), Gaps = 3/816 (0%)
Strand = Plus / Plus
Query: 1 agatctgtcaggcaggtaccgatggtaccgttgatcacaattaccacttcgaaagattga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4527 agatctgtcaggcaggtaccgatggtaccgttgatcacaattaccacttcgaaagattga 4586
Query: 61 gacaattctttcaaaagtgagccagactacccaggcagattcacggtgccacagacatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4587 gacaattctttcaaaagtgagccagactacccaggcagattcacggtgccacagacatat 4646
Query: 121 aa--ccag-tatctccccttttcaggcttgtagatgggatgagccttagagatagtttct 177
|| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4647 aaacccaggtatctccccttttcaggcttgtagatgggatgagccttagagatagtttct 4706
Query: 178 aagaaagcagagccctgttttttgaatgaaccgtcagtactagcaagcgtacagacattg 237
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4707 aagaaagcagagccctgttttttgaatgaaccgtcagtactagcaagcgtagagacattg 4766
Query: 238 tgtggatacatttcgttgtaattgcttgagatgtttagtttttctcttgcagcaactctt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4767 tgtggatacatttcgttgtaattgcttgagatgtttagtttttctcttgcagcaactctt 4826
Query: 298 ttcattaaaagggcatcgtaaagtgaaggatgaacggacctaattatttaagttttcatc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4827 ttcattaaaagggcatcgtaaagtgaaggatgaacggacctaattatttaagttttcatc 4886
Query: 358 acttttataacaactataaaatgtattttgacatatctacgttaacacagaacaattttt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4887 acttttataacaactataaaatgtattttgacatatctacgttaacacagaacaattttt 4946
Query: 418 ggagcatttagggaaggcccggaatcacatgttgttccattacattgtaggagcaattta 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4947 ggagcatttagggaaggcccggaatcacatgttgttccattacattgtaggagcaattta 5006
Query: 478 aagcgtcatttattaaatcattattaaatacgaagctgagcggagaggaactaggatcaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5007 aagcgtcatttattaaatcattattaaatacgaagctgagcggagaggaactaggatcaa 5066
Query: 538 ggctgcagcaacccaatccaaatctgataattatccagcccggcacctaagaatcttcaa 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5067 ggctgcagcaacccaatccaaatctgataattatccagcccggcacctaagaatcttcaa 5126
Query: 598 tgaacttattktctkttgcaaactctaccctttcatccattggctttgcttcgagatccg 657
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5127 tgaacttattgtctgttgcaaactctaccctttcatccattggctttgcttcgagatccg 5186
Query: 658 tcaagggcctaccctggtactctaccgagctcttcttttwttttaatttaktkacctcag 717
||||||||||||||||||||||||||||||||||||| | | |||||||| | |||||||
Sbjct: 5187 tcaagggcctaccctggtactctaccgagctcttcttgtatgttaatttagtgacctcag 5246
Query: 718 agttgtytggacacatttcaggaccacgggtacgattcatataccatggcaagctgaaaa 777
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 5247 agttgtctggacacatttcaggaccacgggtaccgatcatataccatggcaagctgaaaa 5306
Query: 778 gttcctccatagactccaaagaacggcccgtwattt 813
||||||||||||||||||||||||||||||| ||||
Sbjct: 5307 gttcctccatagactccaaagaacggcccgtaattt 5342
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5147
Number of Sequences: 1807
Number of extensions: 5147
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)